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Glycomaterials Chronicles

Explore curated research chronicles, originating experimental data, spectral analysis, and related open-access publications across carbohydrate materials research.

Open Access publications hosted on VTechWorks
In-House Research
Open Access
<p>Coarse-grained molecular dynamics integrated with convolutional neural network for comparing shapes of temperature sensitive bottlebrushes</p>

Coarse-grained molecular dynamics integrated with convolutional neural network for comparing shapes of temperature sensitive bottlebrushes

SY Joshi, S Singh, SA Deshmukh

Department of Chemical Engineering, Virginia Tech, Blacksburg, VA, 24061, USA

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In-House Research
<p>Protein&minus;Ligand CH&minus;&pi; Interactions: Structural Informatics, Energy Function Development, and Docking Implementation</p>

Protein−Ligand CH−π Interactions: Structural Informatics, Energy Function Development, and Docking Implementation

Yao Xiao, Robert J. Woods

The Complex Carbohydrate Research Center, University of Georgia

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In-House Research
<p>Development, Validation, and Applications of Nonbonded Interaction Parameters between Coarse-Grained Amino Acid and Water Models</p>

Development, Validation, and Applications of Nonbonded Interaction Parameters between Coarse-Grained Amino Acid and Water Models

Esmat Mohammadi, Soumil Y. Joshi, Sanket A. Deshmukh

Department of Chemical Engineering, Virginia Tech, Blacksburg, Virginia 24061, U...

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In-House Research
<p>On the use of property-oriented basis sets for the simulation of vibrational chiroptical spectroscopies</p>

On the use of property-oriented basis sets for the simulation of vibrational chiroptical spectroscopies

Brendan M. Shumbergera, Ethan H. Finka,RollinA.Kingb and T. Daniel Crawforda

a. Department of Chemistry, Virginia Tech, Blacksburg, Virginia, U.S.A.

b. De...

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In-House Research
<p>Data Driven Discovery of MOFs for Hydrogen Gas Adsorption</p>

Data Driven Discovery of MOFs for Hydrogen Gas Adsorption

Singh, Samrendra K.; Sose, Abhishek T.; Wang, Fangxi; Bejagam, Karteek K.; Deshm...

Department of Chemical Engineering, Virginia Tech, Blacksburg, Virginia 24061, U...

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In-House Research
<p>Data Driven Computational Design and Experimental Validation of Drugs for Accelerated Mitigation of Pandemic-like Scenarios</p>

Data Driven Computational Design and Experimental Validation of Drugs for Accelerated Mitigation of Pandemic-like Scenarios

Singh, Samrendra K.; King, Kelsie; Gannett, Cole; Chuong, Christina; Joshi, Soum...

Department of Chemical Engineering, Virginia Tech, Blacksburg, Virginia 24061, U...

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In-House Research
<p>Insights into the electronic and structural properties of cellulose and amylose: A comparative force field study</p>

Insights into the electronic and structural properties of cellulose and amylose: A comparative force field study

Esmat Mohammadi1, Justin Lemkul2

1-Department of Chemical Engineering, Virginia Tech, Blacksburg, VA  24061  

2-...

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In-House Research
<p id="screen-reader-main-title">Aggregation of functional groups leads to unexpected lowering of PNIPAM LCST</p>

Aggregation of functional groups leads to unexpected lowering of PNIPAM LCST

Soumil Y. Joshi and Sanket A. Deshmukh

Department of Chemical Engineering, Virginia Tech, Blacksburg, VA 24061, USA

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Local User
<p tabindex="0">Development of Transferable Coarse-Grained Lipid Models with Optimized Structural and Elastic Membrane Properties</p>

Development of Transferable Coarse-Grained Lipid Models with Optimized Structural and Elastic Membrane Properties

Soumil Y. Joshi;1 Teshani Kumarage;2 Rana Ashkar; and Sanket A. Deshmukh1

1Department of Chemical Engineering, Virginia Tech, Blacksburg, VA 24061, USA

2...

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In-House Research
<p>Binding free energy analysis of galectin‐3 natural ligands and synthetic inhibitors</p>

Binding free energy analysis of galectin‐3 natural ligands and synthetic inhibitors

Luke Newman, Valerie Vaissier Welborn

Macromolecules Innovation Institute, Virginia Tech, Blacksburg, Virginia, USA; D...

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External User
<p>Experimentally validated inverse design of FeNiCrCoCu MPEAs and unlocking key insights with explainable AI</p>

Experimentally validated inverse design of FeNiCrCoCu MPEAs and unlocking key insights with explainable AI

Fangxi Wang, Allana G. Iwanicki, Abhishek T. Sose, Lucas A. Pressley, Tyrel M. M...

William H. Miller III Department of Physics and Astronomy, Johns Hopkins Univers...

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In-House Research
<p>Is AMOEBA a Good Force Field for Molecular Dynamics Simulations of Carbohydrates?</p>

Is AMOEBA a Good Force Field for Molecular Dynamics Simulations of Carbohydrates?

Mawuli Deegbey, Ethan W. Sumner, Valerie Vaissier Welborn

Macromolecules Innovation Institute, Virginia Tech, Blacksburg, Virginia 24061, ...

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External User
<p>Are N-linked glycans intrinsically disordered?</p>

Are N-linked glycans intrinsically disordered?

Eliza Gazaway, Rajan Kandel, Oliver C. Grant, Robert J. Woods

Complex Carbohydrate Research Center and Department of Biochemistry and Molecula...

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